STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_05349Ras-related protein Rab-6A. (209 aa)    
Predicted Functional Partners:
G5I_03911
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.993
G5I_04316
Protein RIC1-like protein.
    
 0.944
G5I_09774
Protein bicaudal D.
    
 0.941
G5I_11401
Vam6/Vps39-like protein.
    
 
 0.941
G5I_02537
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.910
G5I_07916
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.909
G5I_14337
Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.909
G5I_11041
Vacuolar protein sorting-associated protein 53-like protein.
    
 0.901
G5I_12169
Vacuolar protein sorting-associated protein 52-like protein.
    
 0.896
G5I_07017
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.874
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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