Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G5I_03937 | G5I_05750 | F4WEA5 | F4WJ72 | Copper homeostasis protein cutC-like protein; Belongs to the cytochrome P450 family. | CUE domain-containing protein 1. | 0.418 |
G5I_05750 | G5I_03937 | F4WJ72 | F4WEA5 | CUE domain-containing protein 1. | Copper homeostasis protein cutC-like protein; Belongs to the cytochrome P450 family. | 0.418 |
G5I_05750 | G5I_10017 | F4WJ72 | F4WVR6 | CUE domain-containing protein 1. | CUE domain-containing protein 2. | 0.455 |
G5I_05750 | G5I_12099 | F4WJ72 | F4X1G9 | CUE domain-containing protein 1. | Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. | 0.530 |
G5I_10017 | G5I_05750 | F4WVR6 | F4WJ72 | CUE domain-containing protein 2. | CUE domain-containing protein 1. | 0.455 |
G5I_12099 | G5I_05750 | F4X1G9 | F4WJ72 | Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. | CUE domain-containing protein 1. | 0.530 |