STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_06243Putative rRNA-processing protein EBP2-like protein. (161 aa)    
Predicted Functional Partners:
G5I_02953
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.949
G5I_08808
Brix domain-containing protein 2-like protein.
   
 
 0.944
G5I_04175
Brix domain-containing protein 1.
   
 
 0.942
G5I_12030
MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein.
   
 
 0.941
G5I_10263
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.935
G5I_10910
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.935
G5I_05837
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.934
G5I_05710
Ribosomal L1 domain-containing protein.
   
 
 0.933
G5I_05130
Putative ribosome production factor 1.
   
 
 0.930
G5I_05549
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.927
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.