STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_06848F-box/LRR-repeat protein 21. (271 aa)    
Predicted Functional Partners:
G5I_05391
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.675
G5I_00807
Cullin-1; Belongs to the cullin family.
    
 0.637
G5I_09797
Cryptochrome-1.
    
 0.620
G5I_01627
Cullin-3; Belongs to the cullin family.
    
 0.533
G5I_04705
NEDD8.
    
 0.521
G5I_09123
Cullin-associated NEDD8-dissociated protein 1.
    
 0.467
G5I_08463
RING-box protein 1A.
    
 0.454
G5I_05872
COMM domain-containing protein 4.
    
 0.430
G5I_09640
Kelch-like protein 10.
    
 0.419
G5I_08821
Protein dumpy-19.
      
 0.418
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.