STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_07827Putative ATP-dependent RNA helicase kurz. (1182 aa)    
Predicted Functional Partners:
G5I_04394
U3 small nucleolar RNA-associated protein 14-like protein A.
   
 0.993
G5I_09141
Nucleolar protein 14-like protein.
   
 0.981
G5I_11624
Something about silencing protein 10.
   
 0.965
G5I_10805
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.964
G5I_10997
Periodic tryptophan protein 2-like protein.
   
 
 0.960
G5I_03007
WD repeat-containing protein 46.
   
 0.959
G5I_12952
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.956
G5I_10407
Bystin.
   
 
 0.954
G5I_01438
Protein RRP5-like protein.
  
 0.953
G5I_09697
U3 small nucleolar RNA-associated protein 6-like protein.
   
   0.953
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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