STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_08874TOM1-like protein 2. (483 aa)    
Predicted Functional Partners:
G5I_04249
Rab5 GDP/GTP exchange factor.
     
 0.929
G5I_05765
Myosin-IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.868
G5I_08904
Toll-interacting protein.
    
 
 0.796
G5I_13338
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.722
G5I_11025
Ubiquitin.
    
   0.679
G5I_11173
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.664
G5I_10302
Ubiquitin.
    
   0.615
G5I_10003
Rab GTPase-binding effector protein 1.
    
 0.591
G5I_00651
Ubiquitin.
    
   0.587
G5I_10906
Serine/threonine-protein kinase LMTK1.
      
 0.526
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.