STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G5I_09099U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (168 aa)    
Predicted Functional Partners:
G5I_01284
U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.849
G5I_02939
U4/U6.U5 tri-snRNP-associated protein 2.
   
 0.836
G5I_05817
Uncharacterized protein.
   
 0.832
G5I_06308
U6 snRNA-associated Sm-like protein LSm7.
    
 0.779
G5I_03568
U5 small nuclear ribonucleoprotein 40 kDa protein.
   
  0.747
G5I_05419
Uncharacterized protein.
   
 0.734
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
  0.728
G5I_13176
Small nuclear ribonucleoprotein G.
   
 0.721
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.719
G5I_11403
U6 snRNA-associated Sm-like protein LSm2.
   
  0.716
Your Current Organism:
Acromyrmex echinatior
NCBI taxonomy Id: 103372
Other names: A. echinatior, Panamanian leafcutter ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.