STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312105_00349Unannotated protein. (535 aa)    
Predicted Functional Partners:
GCA_000312105_02658
Unannotated protein.
  
 
 0.952
GCA_000312105_00348
Unannotated protein.
       0.836
GCA_000312105_00222
Unannotated protein.
    
  0.832
GCA_000312105_02868
Unannotated protein.
  
 0.817
GCA_000312105_00191
Unannotated protein.
    
   0.771
GCA_000312105_00218
Unannotated protein.
    
   0.771
GCA_000312105_00226
Unannotated protein.
    
   0.769
GCA_000312105_00237
Unannotated protein.
   
   0.769
GCA_000312105_00087
Unannotated protein.
   
  0.756
GCA_000312105_01523
Unannotated protein.
   
  0.756
Your Current Organism:
Aeromicrobium massiliense
NCBI taxonomy Id: 1033730
Other names: A. massiliense JC14, Aeromicrobium massiliense JC14, Aeromicrobium sp. JC14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.