STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312105_00486Unannotated protein. (413 aa)    
Predicted Functional Partners:
GCA_000312105_00485
Unannotated protein.
 
  
 0.967
GCA_000312105_00484
Unannotated protein.
 
   
0.917
GCA_000312105_00483
Unannotated protein.
 
  0.884
GCA_000312105_01435
Unannotated protein.
  
  0.755
GCA_000312105_01083
Unannotated protein.
  
  0.749
GCA_000312105_01216
Unannotated protein.
 
  
 0.689
GCA_000312105_02187
Unannotated protein.
  
  0.684
GCA_000312105_02489
Unannotated protein.
  
  0.680
GCA_000312105_00686
Unannotated protein.
  
  0.663
GCA_000312105_00388
Unannotated protein.
  
  0.640
Your Current Organism:
Aeromicrobium massiliense
NCBI taxonomy Id: 1033730
Other names: A. massiliense JC14, Aeromicrobium massiliense JC14, Aeromicrobium sp. JC14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.