STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA42655.1Predicted acyltransferase. (392 aa)    
Predicted Functional Partners:
SEA42848.1
Predicted acyltransferase.
 
     0.825
SEA42692.1
Glycosyl hydrolases family 18; Belongs to the glycosyl hydrolase 18 family.
       0.757
SEA42730.1
PKD-like domain-containing protein.
       0.751
SEA43001.1
Glycosyl hydrolase family 20, catalytic domain.
 
    0.700
SEA42922.1
Starch-binding associating with outer membrane.
 
     0.691
SEA75771.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.673
SEA42772.1
Hexosaminidase.
  
    0.654
SEA42809.1
Glycosyl hydrolase family 20, catalytic domain.
  
    0.654
SEA78590.1
Starch-binding associating with outer membrane.
  
     0.572
SEA84527.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Alistipes timonensis
NCBI taxonomy Id: 1033731
Other names: A. timonensis JC136, Alistipes sp. JC136, Alistipes timonensis JC136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.