STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E1I69_14355Unannotated protein. (111 aa)    
Predicted Functional Partners:
dacB
Unannotated protein.
     
 0.596
murB
Unannotated protein; Cell wall formation.
 
  
 0.501
murC
Unannotated protein; Cell wall formation; Belongs to the MurCDEF family.
    
 0.467
GCA_000285535_00282
Unannotated protein.
       0.434
Your Current Organism:
Bacillus timonensis
NCBI taxonomy Id: 1033734
Other names: B. timonensis, Bacillus sp. 10403023, CSUR P162, DSM 25372, strain 10403023, strain MM10403188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.