STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E1I69_08275Unannotated protein. (154 aa)    
Predicted Functional Partners:
E1I69_08270
Unannotated protein.
  
    0.747
GCA_000285535_01115
Unannotated protein.
  
    0.747
E1I69_08280
Unannotated protein.
 
    0.738
gltB
Unannotated protein.
   
 
 0.705
aroF
Unannotated protein.
    
  0.701
E1I69_14670
Unannotated protein.
    
  0.689
GCA_000285535_02106
Unannotated protein.
  
     0.488
E1I69_04635
Unannotated protein.
  
 
  0.447
rnc
Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.439
GCA_000285535_02649
Unannotated protein.
  
 
 0.431
Your Current Organism:
Bacillus timonensis
NCBI taxonomy Id: 1033734
Other names: B. timonensis, Bacillus sp. 10403023, CSUR P162, DSM 25372, strain 10403023, strain MM10403188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.