STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000285835_00913Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_000285835_01088
Unannotated protein.
  
     0.676
GCA_000285835_02454
Unannotated protein.
  
     0.632
GCA_000285835_00630
Unannotated protein.
  
     0.614
GCA_000285835_02048
Unannotated protein.
  
     0.613
GCA_000285835_00937
Unannotated protein.
  
     0.604
GCA_000285835_02810
Unannotated protein.
  
     0.580
GCA_000285835_01870
Unannotated protein.
  
     0.575
GCA_000285835_00912
Unannotated protein.
       0.550
GCA_000285835_02492
Unannotated protein.
  
     0.549
GCA_000285835_01437
Unannotated protein.
  
     0.545
Your Current Organism:
Brevibacterium senegalense
NCBI taxonomy Id: 1033736
Other names: B. senegalense, Brevibacterium senegalense Kokcha et al. 2013, Brevibacterium sp. JC43, CSUR P155, DSM 25783, strain JC43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.