STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001006805_03032Unannotated protein. (85 aa)    
Predicted Functional Partners:
GCA_001006805_01887
Unannotated protein.
  
 0.997
GCA_001006805_00270
Unannotated protein.
 
  
 0.955
GCA_001006805_00818
Unannotated protein.
  
 
 0.937
GCA_001006805_01605
Unannotated protein.
  
 
 0.937
GCA_001006805_07450
Unannotated protein.
  
  
 0.846
GCA_001006805_03031
Unannotated protein.
 
 
 0.845
GCA_001006805_06858
Unannotated protein.
 
 0.843
GCA_001006805_00840
Unannotated protein.
 
  
 0.842
GCA_001006805_00598
Unannotated protein.
   
    0.811
GCA_001006805_05451
Unannotated protein.
  
 
 0.794
Your Current Organism:
Microvirga massiliensis
NCBI taxonomy Id: 1033741
Other names: CSUR P153, DSM 26813, M. massiliensis, Microvirga massiliensis Caputo et al. 2016, Microvirga sp. JC119, strain JC119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.