STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001006805_06622Unannotated protein. (314 aa)    
Predicted Functional Partners:
GCA_001006805_07237
Unannotated protein.
  
     0.771
GCA_001006805_07236
Unannotated protein.
  
     0.768
GCA_001006805_06578
Unannotated protein.
  
  
  0.767
GCA_001006805_06165
Unannotated protein.
  
     0.713
GCA_001006805_05577
Unannotated protein.
   
 
  0.500
GCA_001006805_06598
Unannotated protein.
  
     0.494
GCA_001006805_08197
Unannotated protein.
  
     0.487
GCA_001006805_08682
Unannotated protein.
  
     0.480
GCA_001006805_02335
Unannotated protein.
  
     0.477
GCA_001006805_06599
Unannotated protein.
  
     0.475
Your Current Organism:
Microvirga massiliensis
NCBI taxonomy Id: 1033741
Other names: CSUR P153, DSM 26813, M. massiliensis, Microvirga massiliensis Caputo et al. 2016, Microvirga sp. JC119, strain JC119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.