STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001006805_06784Unannotated protein. (386 aa)    
Predicted Functional Partners:
GCA_001006805_04737
Unannotated protein.
  
  
  0.835
GCA_001006805_05089
Unannotated protein.
    
  0.795
GCA_001006805_02690
Unannotated protein.
    
  0.788
GCA_001006805_04933
Unannotated protein.
    
  0.788
GCA_001006805_00626
Unannotated protein.
    
  0.762
GCA_001006805_06785
Unannotated protein.
 
     0.743
GCA_001006805_00630
Unannotated protein.
    
  0.741
GCA_001006805_06786
Unannotated protein.
       0.644
GCA_001006805_01402
Unannotated protein.
    
  0.607
GCA_001006805_09088
Unannotated protein.
   
 
  0.561
Your Current Organism:
Microvirga massiliensis
NCBI taxonomy Id: 1033741
Other names: CSUR P153, DSM 26813, M. massiliensis, Microvirga massiliensis Caputo et al. 2016, Microvirga sp. JC119, strain JC119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.