STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20669.11-deoxy-D-xylulose-5-phosphate reductoisomerase protein. (448 aa)    
Predicted Functional Partners:
ERJ20668.1
Succinate dehydrogenase cytochrome b subunit family protein.
  
    0.803
ERJ17734.1
Alcohol dehydrogenase cytochrome c protein; Overlaps another CDS with the same product name.
 
 
 0.714
ERJ17735.1
Alcohol dehydrogenase cytochrome c protein; Overlaps CDS with the same product name.
 
 
 0.712
exaA
ExaA protein.
 
 
 0.710
ERJ18247.1
Cbb3-type cytochrome c oxidase subunit protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
 0.638
ERJ20670.1
Anthranilate synthase component I protein.
       0.405
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.