STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20674.1Mannonate dehydratase protein. (240 aa)    
Predicted Functional Partners:
ERJ20673.1
TonB dependent outer membrane ferrichrome-iron receptor protein; Overlaps CDS with the same product name.
  
 0.991
ERJ20672.1
TonB dependent outer membrane ferrichrome-iron receptor protein; Overlaps another CDS with the same product name.
     0.990
bfrF
Putative ferric siderophore receptor protein.
  
 0.978
bfrG
Putative TonB-dependent receptor protein.
 
  
 0.741
ERJ19144.1
Titin protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.667
irgA
Iron-regulated outer membrane virulence protein.
  
  
 0.647
ERJ19507.1
TonB-like protein.
 
 
 0.618
yiuR
Putative outer membrane iron-siderophore receptor protein.
  
  
 0.607
ERJ19687.1
ABC Fe+3 hydroxamate transporter periplasmic siderophore binding protein.
   
 0.557
tonB
TonB protein.
 
 
 0.544
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.