STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiEAliphatic amidase protein; Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates. (348 aa)    
Predicted Functional Partners:
ERJ20774.1
Amidase protein.
 
  
 0.828
ERJ20775.1
Zinc ribbon domain protein.
 
     0.769
amiB
ATP-dependent protease ATP-binding subunit-like protein AmiB.
 
    0.766
gltB
Glutamate synthase large chain protein.
    
 0.710
ERJ18314.1
Bifunctional proline oxidoreductase-transcriptional repressor protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.657
lpdA
Dihydrolipoyl dehydrogenase protein.
     
 0.640
ERJ20768.1
Two-component system sensor histidine kinase RpfC protein.
 
   0.587
ERJ20771.1
ABC transporter permease protein; Overlaps CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
    0.559
ERJ20773.1
ABC transporter ATP-binding protein; Overlaps CDS with the same product name.
 
  
  0.558
purL
Phosphoribosylformylglycinamidine synthase protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
 
 0.513
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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