STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20803.1Serine protease protein. (424 aa)    
Predicted Functional Partners:
ftsK
DNA translocase FtsK protein.
    
 
 0.888
ERJ20804.1
Hypothetical protein.
       0.773
ERJ18018.1
Sensory box-GGDEF family protein.
  
 
 0.705
ERJ19852.1
Disulfide bond corrector DsbC protein.
    
   0.687
ERJ17877.1
Disulfide bond corrector DsbC protein.
    
   0.687
ERJ18309.1
Putative extracellular nuclease protein.
  
 0.651
ERJ20660.1
Alkaline phosphatase protein.
  
  
  0.626
argE
Acetylornithine deacetylase protein.
 
     0.603
ERJ18992.1
N-acetylmuramoyl-L-alanine amidase protein.
    
 0.597
tesA
Acyl-CoA thioesterase I protein.
    
  0.587
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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