STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20864.1Sulfite reductase flavoprotein alpha-component. (478 aa)    
Predicted Functional Partners:
bfrG
Putative TonB-dependent receptor protein.
 
  
 0.925
ycbX
Putative 2Fe-2S cluster-containing protein.
    
  0.657
ERJ19982.1
Formate dehydrogenase alpha subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.655
cysJ
Sulfite reductase NADPH flavoprotein alpha-component.
     
  0.654
ERJ20449.1
TonB-dependent receptor protein.
 
  
 0.609
ERJ20672.1
TonB dependent outer membrane ferrichrome-iron receptor protein; Overlaps another CDS with the same product name.
 
  
 0.586
ERJ20747.1
FMN reductase protein.
  
  
  0.543
ERJ20674.1
Mannonate dehydratase protein.
 
  
 0.532
bfrF
Putative ferric siderophore receptor protein.
 
  
 0.511
ERJ20866.1
RES domain-containing protein.
       0.491
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.