STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprGOuter membrane protein OprG. (226 aa)    
Predicted Functional Partners:
ERJ17763.1
Oxygen-independent coproporphyrinogen III oxidase protein; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.914
ccoO
Cbb3-type cytochrome c oxidase subunit II CcoO protein.
 
    0.827
ccoN
Cytochrome c oxidase cbb3-type subunit I protein; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.767
ERJ18245.1
Putative ferredoxin protein.
 
    0.670
anr
Transcriptional activator protein anr.
 
  
 0.640
arcA
Arginine deiminase protein.
   
    0.554
ERJ20265.1
Hypothetical protein.
  
     0.502
ERJ17660.1
FMN reductase protein.
  
     0.446
ERJ18247.1
Cbb3-type cytochrome c oxidase subunit protein; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
    0.425
ERJ20670.1
Anthranilate synthase component I protein.
   
    0.410
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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