STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asdAspartate-semialdehyde dehydrogenase protein; Belongs to the aspartate-semialdehyde dehydrogenase family. (361 aa)    
Predicted Functional Partners:
lysC
Aspartokinase protein; Belongs to the aspartokinase family.
  
 
 0.937
hom
Homoserine dehydrogenase protein.
 
 0.899
dapA
4-hydroxy-tetrahydrodipicolinate synthase protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.850
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
     
 0.781
pgk
Phosphoglycerate kinase protein; Belongs to the phosphoglycerate kinase family.
  
 0.706
ectB
Diaminobutyrate--2-oxoglutarate aminotransferase protein; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.679
dapF
Diaminopimelate epimerase protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
  
 0.671
ilvH
Acetolactate synthase isozyme 3 small subunit protein.
  
 
 0.656
gltB
Glutamate synthase large chain protein.
  
  
 0.646
ERJ17831.1
Dihydrodipicolinate synthase protein; Belongs to the DapA family.
  
 
 0.637
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.