STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20314.1Surface antigen protein. (615 aa)    
Predicted Functional Partners:
ERJ20315.1
Family of unknown function protein.
 
 0.998
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.624
ppiD
Peptidyl-prolyl cis-trans isomerase PpiD protein.
  
     0.547
ERJ18838.1
TPR domain-containing protein.
  
     0.505
ERJ18931.1
Hypothetical protein.
  
     0.461
ERJ20313.1
Peptidase S9 prolyl oligopeptidase protein.
       0.452
ERJ18593.1
Diaminobutyrate-2-oxoglutarate transaminase protein.
 
     0.443
phoQ
Two-component system sensor protein.
  
    0.430
manB
Phosphomannomutase protein.
  
    0.426
ERJ18802.1
Hydroxyacylglutathione hydrolase protein.
  
     0.412
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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