STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20385.1isovaleryl-CoA dehydrogenase protein. (577 aa)    
Predicted Functional Partners:
nuoC
NADH-quinone oxidoreductase subunit C-D protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.959
ERJ19358.1
3-hydroxyacyl-CoA dehydrogenase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.890
fadJ
Fatty acid oxidation complex subunit alpha protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.873
fadB
Fatty acid oxidation complex subunit alpha protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.873
ERJ20386.1
Glutaconate CoA-transferase subunit B protein; Belongs to the CoA-transferase III family.
  
 
  0.784
ERJ20387.1
alpha-methylacyl-CoA racemase protein; Belongs to the CoA-transferase III family.
  
 
  0.784
etfA
Electron transfer flavoprotein alpha subunit.
 0.763
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
 
 
 0.725
ERJ19356.1
Isoquinoline 1-oxidoreductase protein.
  
     0.697
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.691
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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