STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20422.1Mn2 protein. (444 aa)    
Predicted Functional Partners:
ERJ17758.1
Urea carboxylase protein.
  
  
 0.680
ERJ17662.1
Urea carboxylase protein.
  
  
 0.680
ERJ20463.1
Sodium-dependent transporter protein.
  
     0.564
ERJ20421.1
Oxidoreductase protein.
       0.548
ERJ20423.1
Hypothetical protein.
       0.527
ERJ20640.1
IMP dehydrogenase protein.
  
   
 0.490
cysH
Phosphoadenosine phosphosulfate reductase protein.
  
     0.488
sitC
ABC Mn+2-Fe+2 transporter inner membrane subunit SitC protein.
   
  
 0.466
sitD
ABC Mn+2-Fe+2 transporter inner membrane subunit SitD protein.
   
  
 0.466
ERJ20264.1
Hypothetical protein.
    
 0.453
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.