STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20450.1S-formylglutathione hydrolase protein. (316 aa)    
Predicted Functional Partners:
ERJ20449.1
TonB-dependent receptor protein.
 
     0.905
viuB
Vibriobactin utilization protein ViuB.
 
     0.819
ERJ18628.1
Palmitoyl-protein thioesterase.
  
    0.667
ERJ20448.1
Transcriptional regulatory protein.
 
    0.658
ERJ20492.1
Sucrose phosphorylase protein.
    
  0.631
ERJ20672.1
TonB dependent outer membrane ferrichrome-iron receptor protein; Overlaps another CDS with the same product name.
 
     0.513
ERJ20447.1
Cytochrome B561 Energy production.
 
     0.512
ERJ20674.1
Mannonate dehydratase protein.
 
     0.494
bfrF
Putative ferric siderophore receptor protein.
 
  
 0.479
yiuR
Putative outer membrane iron-siderophore receptor protein.
 
  
 0.467
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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