STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecEIron dicitrate transport system permease protein FecE. (282 aa)    
Predicted Functional Partners:
fepD
ABC transporter membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.998
ERJ18798.1
Putative permease of ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.996
fhuB
Ferrichrome transport system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.992
fecB
Iron dicitrate transport system permease protein FecB.
 
 0.990
fecD
Iron dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.980
ERJ19687.1
ABC Fe+3 hydroxamate transporter periplasmic siderophore binding protein.
 
 0.950
btuF
Putative vitamin B12 transport protein.
 
 0.924
atmA
ABC-type Ni2+-Co2+ export system bifunctional ATPase protein.
 
     
0.891
cobQ
Adenosylcobyric acid synthase protein; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
  0.856
ERJ18804.1
PDDEXK 3 family protein.
  
 0.810
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.