STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20501.1Putative secreted protein. (275 aa)    
Predicted Functional Partners:
ERJ19952.1
Selenocysteine lyase protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.966
ERJ20492.1
Sucrose phosphorylase protein.
  
 
 0.696
ERJ20512.1
Sporulation related domain protein.
  
    0.687
ERJ20503.1
Amidohydrolase 2 protein.
     
 0.576
ERJ17622.1
Hypothetical protein.
  
     0.576
oppF
Putative oligopeptide transport ATP-binding ABC transport protein; Belongs to the ABC transporter superfamily.
       0.565
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.493
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.491
psd-2
Phosphatidylserine decarboxylase proenzyme protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
  
  
  0.481
gcvR
Glycine cleavage system transcriptional repressor protein.
  
     0.471
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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