STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20506.1Alkaline phosphatase D protein. (614 aa)    
Predicted Functional Partners:
ERJ20505.1
Hypothetical protein.
 
  
 0.923
ERJ20359.1
Glycerophosphoryl diester phosphodiesterase protein.
 
 0.676
folB
Dihydroneopterin aldolase protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.675
ERJ18999.1
Deoxyguanosine kinase protein.
    
  0.655
ERJ19676.1
Alcohol dehydrogenase protein; Overlaps another CDS with the same product name.
 
      0.620
ERJ20504.1
Hypothetical protein.
       0.590
ERJ20471.1
Putative serine-threonine protein kinase Putative secreted protein.
  
  
  0.553
ERJ20747.1
FMN reductase protein.
  
  
  0.508
ERJ20516.1
MutT-like protein.
  
  
  0.477
ERJ17647.1
Glycoprotein 3-alpha-L-fucosyltransferase.
    
  0.436
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.