STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nlpCPutative endopeptidase NlpC protein. (160 aa)    
Predicted Functional Partners:
ERJ18961.1
Chitinase protein.
  
     0.748
ERJ20526.1
Cation transporter VIC family protein.
       0.697
ppx
Exopolyphosphatase protein; Belongs to the GppA/Ppx family.
 
     0.622
ERJ18992.1
N-acetylmuramoyl-L-alanine amidase protein.
  
  
 0.503
ERJ19277.1
PAS sensor diguanylate cyclase protein.
  
  
 0.502
mltB
Membrane bound lytic murein transglycosylase B protein.
     
 0.499
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.454
ERJ17795.1
precorrin-3B C17-methyltransferase protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.443
ERJ19341.1
Peptidoglycan-specific endopeptidase M23 family protein.
  
  
 0.435
ERJ18559.1
Peptidase M23B protein.
  
  
 0.435
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.