STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20559.1ATPase associated with various cellular activities AAA 5 protein. (297 aa)    
Predicted Functional Partners:
ERJ20560.1
VWA containing CoxE family protein.
 
     0.947
ERJ18624.1
VWA containing CoxE family protein.
 
     0.775
ERJ20558.1
Glutaconate CoA-transferase subunit B protein.
       0.773
ERJ20112.1
Carbon-monoxide dehydrogenase small subunit protein; Overlaps another CDS with the same product name.
 
     0.745
cutM
CutM protein.
 
   
 0.721
ERJ20557.1
Putative lipid kinase YegS protein.
       0.618
ERJ20115.1
Carbon-monoxide dehydrogenase large subunit protein.
 
     0.615
ERJ19732.1
VWA containing CoxE family protein.
 
    0.472
ERJ20556.1
Hypothetical protein.
       0.463
ERJ18472.1
Glucosamine-1-phosphate N-acetyltransferase protein.
 
     0.440
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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