STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20124.1Putative large integral membrane transport protein. (436 aa)    
Predicted Functional Partners:
ERJ20125.1
Putative membrane protein.
  
 0.952
ERJ20126.1
Extracellular solute-binding protein family 7 bacteria.
 
  
 0.906
ERJ19541.1
Putative exported protein.
     0.854
ERJ19147.1
TRAP transporter DctQ-like membrane protein.
  
 0.823
ERJ19149.1
Transporter periplasmic component protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.787
ERJ17983.1
DctP subunit protein.
 
     0.772
ERJ20250.1
TRAP dicarboxylate transporter subunit DctP protein.
     0.761
ERJ20127.1
Hypothetical protein.
       0.429
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.