STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20210.1Glycoprotein 3-alpha-L-fucosyltransferase. (348 aa)    
Predicted Functional Partners:
ERJ20177.1
UDP-23-diacylglucosamine hydrolase protein.
     0.964
wcaG
NAD dependent epimerase-dehydratase protein.
 
 
  0.833
xanB
Xanthan biosynthesis protein XanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.689
ERJ18312.1
UDPglucose 6-dehydrogenase protein.
 
  
 0.633
ERJ20212.1
Hypothetical protein.
       0.548
ERJ20209.1
Alcohol dehydrogenase protein.
       0.444
rfbB
dTDP-glucose-46-dehydratase RfbB protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.442
ERJ18850.1
Alpha/beta hydrolase protein.
    
 
 0.441
exoQ
Exopolysaccharide production protein.
 
 
 0.408
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.