STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20227.1Putative membrane protein. (712 aa)    
Predicted Functional Partners:
ERJ20226.1
Membrane lipoprotein.
       0.800
ERJ20248.1
Tripartite ATP-independent periplasmic transporter DctQ protein.
 
 0.680
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
    
  0.656
yfiQ
Putative acetyltransferase protein.
  
 
  0.647
ERJ17982.1
Tripartite ATP-independent periplasmic transporter DctQ component protein.
  
 0.634
ERJ20850.1
Long-chain acyl-CoA synthetase protein.
    
 0.624
paaZ
Bifunctional protein PaaZ.
     
 0.621
ERJ19542.1
Putative C4-dicarboxylate transporter small permease protein.
  
 0.612
ERJ19543.1
Tripartite ATP-independent periplasmic transporter DctQ component protein.
  
 0.611
adeT
RND type efflux pump protein.
  
  
 0.594
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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