STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20234.1Two-component system chemotaxis family CheB-CheR fusion protein. (811 aa)    
Predicted Functional Partners:
ERJ18900.1
Two-component system chemotaxis family CheB-CheR fusion protein.
 
 0.998
ERJ18394.1
Two-component system NarL family capsular synthesis sensor histidine kinase RcsC protein.
 
 0.998
ERJ18955.1
Two-component system NarL family sensor histidine kinase BarA protein.
  
 0.997
ERJ18890.1
Response receiver sensor diguanylate cyclase PAS domain-containing protein.
 
0.997
ERJ18816.1
Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR protein.
 
 0.997
ERJ19277.1
PAS sensor diguanylate cyclase protein.
 
0.996
ERJ17743.1
GGDEF domain protein.
 
 0.996
ERJ18814.1
Diguanylate cyclase protein.
0.995
ERJ17615.1
Two-component system chemotaxis family CheB-CheR fusion protein; Overlaps another CDS with the same product name.
 
 0.995
ERJ19794.1
Sensor diguanylate cyclase-phosphodiesterase PAS domain-containing protein.
 
0.994
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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