STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20255.1hydroxymethylglutaryl-CoA reductase protein; Belongs to the HMG-CoA reductase family. (760 aa)    
Predicted Functional Partners:
mvaS
Hydroxymethylglutaryl-CoA synthase protein.
 
 
 0.998
mvaD
Diphosphomevalonate decarboxylase protein.
 
 0.998
ERJ20843.1
14-dihydroxy-2-naphthoate octaprenyltransferase protein.
    
 
 0.965
ERJ19564.1
Ray-related protein.
    
   0.957
idi
Isopentenyl-diphosphate Delta-isomerase protein; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.955
pcaF
Beta-ketoadipyl CoA thiolase protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.938
atoB
Acetyl-CoA acetyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.932
fadA
3-ketoacyl-CoA thiolase protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
 
 
 0.924
ERJ17454.1
acetyl-CoA C-acetyltransferase protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.866
ERJ20798.1
2-octaprenyl-3-methyl-6-methoxy-14-benzoquinol hydroxylase protein.
   
  
 0.812
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.