STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19989.1Putative racemase protein. (240 aa)    
Predicted Functional Partners:
aguB
N-carbamylputrescine amidohydrolase protein.
      0.891
ERJ19988.1
Phosphonoacetate hydrolase protein.
 
     0.872
ERJ19986.1
Chitin deacetylase protein.
 
  
  0.815
ERJ19609.1
5-hydroxyisourate hydrolase protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
  0.776
ERJ19984.1
Ureidoglycine aminohydrolase protein.
 
     0.747
ERJ20147.1
Urate oxidase protein.
 
  
  0.727
ERJ19607.1
Urate oxidase protein.
 
  
  0.675
allA
Ureidoglycolate hydrolase protein.
 
     0.620
ERJ19586.1
Dihydroorotase protein.
   
  0.547
pyrC
Dihydroorotase protein.
    
  0.460
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.