STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20017.1ABC transporter ATP-binding protein. (234 aa)    
Predicted Functional Partners:
ERJ20020.1
Inner-membrane translocator protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.995
ERJ20016.1
Putative branched-chain amino acid ABC transporter ATP-binding subunit protein.
 
 
0.989
ERJ19371.1
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
livM
Branched-chain amino acid ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
ERJ20018.1
ABC transporter substrate binding protein Branched chain amino acid.
 
 
  0.952
ERJ20019.1
Putative branched-chain amino acid transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.938
livG
Branched-chain amino acid ABC transporter ATP-binding protein.
 
0.917
ERJ19375.1
Putative branched amino acid related transport system bifunctional protein Membrane; Overlaps another CDS with the same product name.
 
 
0.911
ERJ20854.1
ABC transporter ATP-binding protein.
 
 
0.895
ERJ19376.1
Putative branched amino acid related transport system bifunctional protein Membrane; Overlaps CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
  0.879
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.