STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20057.1Protein of unknown function DUF262. (587 aa)    
Predicted Functional Partners:
ERJ20058.1
Type I site-specific deoxyribonuclease HsdR family protein; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   0.978
ERJ20055.1
Type I restriction-modification enzyme S subunit EcoA family putative protein.
 
    0.920
ERJ20272.1
Porin family outer membrane protein.
   
    0.815
ERJ20054.1
Type I restriction system adenine methylase protein.
    0.777
ERJ20056.1
DNA-binding protein.
       0.624
ERJ17592.1
Transcriptional regulator-like protein.
  
 
  0.598
gltB
Glutamate synthase large chain protein.
     
 0.552
ERJ19456.1
NADH dehydrogenase protein.
  
    0.519
ERJ19457.1
NAD-dependent epimerase-dehydratase protein.
  
    0.519
ERJ20059.1
Hypothetical protein.
       0.509
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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