STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20095.1NAD-dependent oxidoreductase protein. (317 aa)    
Predicted Functional Partners:
ERJ18313.1
Superoxide dismutase Fe-Mn family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.998
lysS-2
Lysine--tRNA ligase protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.826
rfbB
dTDP-glucose-46-dehydratase RfbB protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.790
wbpO
Polysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.774
ERJ18393.1
UDP-glucose 4-epimerase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.729
ERJ20792.1
Adenosine kinase protein.
  
 
 0.717
ERJ19558.1
Strictosidine synthase protein.
  
 
 0.712
ERJ20137.1
Amidohydrolase 2 protein.
    
 0.701
ERJ18312.1
UDPglucose 6-dehydrogenase protein.
    
 0.674
ycbX
Putative 2Fe-2S cluster-containing protein.
    
  0.668
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.