STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ20107.1ABC transporter permease protein; Overlaps CDS with the same product name. (339 aa)    
Predicted Functional Partners:
ERJ20106.1
ABC transporter permease protein.
 
 0.990
ERJ20108.1
ABC transporter substrate-binding protein.
 0.988
ERJ20105.1
ABC di-oligopeptide transporter ATPase subunit protein; Belongs to the ABC transporter superfamily.
 
 0.984
ERJ20104.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.983
ERJ20498.1
Binding-protein-dependent transport systems inner membrane component; Overlaps CDS with the same product name.
 
 0.965
oppF
Putative oligopeptide transport ATP-binding ABC transport protein; Belongs to the ABC transporter superfamily.
 
 0.947
oppD
Oligopeptide transport ATP-binding protein OppD.
 
 0.931
ERJ20392.1
Putative ABC transporter ATP-binding subunit protein; Belongs to the ABC transporter superfamily.
 
 0.914
oppA
Oligopeptide ABC transporter periplasmic binding protein.
 
 0.905
oppC
Oligopeptide transport system permease protein.
 
 0.900
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.