STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19831.1Isoprenylcysteine carboxyl methyltransferase protein. (58 aa)    
Predicted Functional Partners:
metH
Methionine synthase protein.
    
  0.656
metH2
5-methyltetrahydrofolate-homocysteine methyltransferase protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.656
betL
Glycine betaine transporter BetL protein; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.636
ERJ19830.1
Ribosomal protein L24 conjectural.
       0.511
ERJ19833.1
Hypothetical protein.
       0.464
ERJ20174.1
Unspecific monooxygenase protein.
    
  0.450
thiF
Thiamine biosynthesis protein.
    
 0.442
ERJ19012.1
NAD+ diphosphatase protein.
    
 0.442
ribF
Riboflavin biosynthesis protein; Belongs to the ribF family.
     
 0.438
ERJ19829.1
Cardiolipin synthetase protein.
  
    0.427
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.