STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19718.11-deoxy-D-xylulose-5-phosphate reductoisomerase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (270 aa)    
Predicted Functional Partners:
ERJ19722.1
Haloacetate dehalogenase protein.
 
  
  0.945
ERJ18613.1
3-oxoacyl-acyl-carrier protein reductase.
  
 
  0.763
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
 
 
 0.742
ERJ19719.1
Putative TetR-family regulatory protein.
 
     0.707
ERJ19710.1
Nitric-oxide synthase bacterial protein.
 
  0.645
ERJ19167.1
Cyclohexanone monooxygenase protein.
 
  0.608
ERJ19721.1
Phthalate 45-dioxygenase protein.
  
     0.601
ERJ19720.1
Putative membrane protein.
  
     0.599
hemC
Porphobilinogen deaminase protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
 
      0.599
ERJ19120.1
Putative membrane protein.
  
     0.596
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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