STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tktATransketolase protein; Belongs to the transketolase family. (666 aa)    
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase protein; Belongs to the ribulose-phosphate 3-epimerase family.
 0.952
guaB
Inosine-5'-monophosphate dehydrogenase protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.908
pgk
Phosphoglycerate kinase protein; Belongs to the phosphoglycerate kinase family.
 
 0.901
gapA
Glyceraldehyde 3-phosphate dehydrogenase 1 protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
 0.892
lpdA
Dihydrolipoyl dehydrogenase protein.
  
 0.856
eno
Enolase protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
  
 0.821
rpiA
Ribose-5-phosphate isomerase A protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.812
pgi
Glucose-6-phosphate isomerase protein; Belongs to the GPI family.
 
 0.809
tpiA
Triosephosphate isomerase protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 0.752
kpsF
Arabinose 5-phosphate isomerase protein.
  
 
 0.750
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.