STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19740.1Mammalian cell entry protein. (327 aa)    
Predicted Functional Partners:
ERJ19739.1
ABC transporter component protein.
 
   
 0.896
ERJ19738.1
Glutamate-1-semialdehyde 21-aminomutase protein.
 
     0.815
ERJ19741.1
Lipoprotein.
     
 0.787
ERJ17866.1
Pyruvate kinase protein.
 
  
 0.770
ERJ19737.1
RND efflux system outer membrane protein NodT family protein.
 
     0.714
ERJ19735.1
Efflux transporter RND family MFP subunit protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.654
ERJ19736.1
Octaprenyl-diphosphate synthase protein.
 
     0.651
bpeR
TetR family regulatory protein.
       0.442
ERJ20540.1
Putative lipoprotein.
  
    0.420
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.