STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19795.1Replicative DNA helicase protein. (571 aa)    
Predicted Functional Partners:
ERJ20787.1
Two-component system chemotaxis family CheB-CheR fusion protein.
 
 
 
 0.974
ERJ18194.1
Two-component system NarL family sensor histidine kinase UhpB protein.
   
 
 0.967
kaiB
Circadian clock protein KaiB.
 
     0.915
ERJ19794.1
Sensor diguanylate cyclase-phosphodiesterase PAS domain-containing protein.
       0.784
ERJ17615.1
Two-component system chemotaxis family CheB-CheR fusion protein; Overlaps another CDS with the same product name.
 
  
 0.589
ERJ18816.1
Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR protein.
 
   
 0.581
ERJ17616.1
Two-component system chemotaxis family CheB-CheR fusion protein; Overlaps CDS with the same product name.
 
  
 0.558
dnaB
Replicative DNA helicase protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
     
 0.468
ERJ18893.1
Two-component system chemotaxis family sensor kinase CheA protein.
 
   
 0.413
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.