STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtaD5-methylthioadenosine-S-adenosylhomocysteine deaminase protein. (479 aa)    
Predicted Functional Partners:
ERJ19583.1
ABC transporter substrate binding protein.
 
     0.785
ERJ19586.1
Dihydroorotase protein.
 
  
 0.784
ERJ19585.1
ABC transporter nucleotide binding-ATPase protein.
 
     0.763
ERJ19584.1
ABC transporter membrane spanning protein.
 
    0.747
fabG
3-oxoacyl-acyl-carrier protein reductase.
       0.676
ERJ18296.1
5'-methylthioadenosine phosphorylase protein; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
 
  
 0.557
ERJ19588.1
ABC transporter substrate binding protein.
 
     0.525
ERJ19589.1
Isochorismatase protein.
 
     0.518
cutM
CutM protein.
 
 
  0.461
tilS
tRNA-lysidine synthase protein; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
  
  0.448
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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