STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19638.1Sulfur oxidation SoxY protein. (273 aa)    
Predicted Functional Partners:
ERJ19639.1
Beta-lactamase protein.
 
     0.949
ERJ17593.1
Alkaline phosphatase protein; Belongs to the 5'-nucleotidase family.
   
 0.870
ERJ18210.1
PHP domain protein.
   
 0.850
ERJ17735.1
Alcohol dehydrogenase cytochrome c protein; Overlaps CDS with the same product name.
 
  
 0.794
exaA
ExaA protein.
 
  
 0.789
ERJ19637.1
Phospholipase A2 protein.
       0.773
ERJ17734.1
Alcohol dehydrogenase cytochrome c protein; Overlaps another CDS with the same product name.
 
  
 0.748
ERJ19652.1
Periplasmic binding protein.
 
     0.674
ERJ19651.1
6-phosphogluconolactonase protein.
 
     0.627
sat
Sulfate adenylyltransferase protein; Belongs to the sulfate adenylyltransferase family.
     
 0.611
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.