STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ19646.1Cytochrome-related protein. (128 aa)    
Predicted Functional Partners:
ERJ19644.1
Sulfide dehydrogenase flavoprotein subunit.
 
 
 0.974
ERJ19645.1
Flavocytochrome C flavoprotein subunit.
 
 
 0.973
ERJ20750.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein.
   
 0.797
ccoO
Cbb3-type cytochrome c oxidase subunit II CcoO protein.
  
 0.693
ctaC
Cytochrome c oxidase subunit 2 protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.687
ERJ18238.1
Nitrite reductase protein; Belongs to the multicopper oxidase family.
    
 0.686
ccoN
Cytochrome c oxidase cbb3-type subunit I protein; Belongs to the heme-copper respiratory oxidase family.
  
 0.665
ERJ17734.1
Alcohol dehydrogenase cytochrome c protein; Overlaps another CDS with the same product name.
  
 
  0.613
ERJ17735.1
Alcohol dehydrogenase cytochrome c protein; Overlaps CDS with the same product name.
  
 
  0.613
exaA
ExaA protein.
  
 
  0.613
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.